diff --git a/documentation/DCP-documentation/step_2_submit_jobs.md b/documentation/DCP-documentation/step_2_submit_jobs.md index f26dfc8..0433078 100644 --- a/documentation/DCP-documentation/step_2_submit_jobs.md +++ b/documentation/DCP-documentation/step_2_submit_jobs.md @@ -100,6 +100,8 @@ Separate values with commas and no spaces and surround with quotation marks (e.g Formats wells passed with `--plate format` or `--rows` and `--columns` but not `--wells`. (e.g. `A1` NOT `A01`) * `--sites `: a custom list of sites (fields of view) to be analyzed. +Default is 9 sites (1 to 9). +Not used by `illum`, `qc`, or `assaydev` steps. Separate values with commas and no spaces and surround with quotation marks (e.g. `"1,2,3,4,5,6"`) ### Overwrite structural defaults