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ErinWeisbart merged 2 commits into from
Nov 13, 2024
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Update step_2_submit_jobs.md #183

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Update step_2_submit_jobs.md
emiglietta Nov 12, 2024
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ErinWeisbart Nov 13, 2024
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2 changes: 2 additions & 0 deletions documentation/DCP-documentation/step_2_submit_jobs.md
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Expand Up @@ -100,6 +100,8 @@ Separate values with commas and no spaces and surround with quotation marks (e.g
Formats wells passed with `--plate format` or `--rows` and `--columns` but not `--wells`.
(e.g. `A1` NOT `A01`)
* `--sites <value>`: a custom list of sites (fields of view) to be analyzed.
Default is 9 sites (1 to 9).
Not used by `illum`, `qc`, or `assaydev` steps.
Separate values with commas and no spaces and surround with quotation marks (e.g. `"1,2,3,4,5,6"`)

### Overwrite structural defaults
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