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spm8Batch/daisyChained to be pulled into spm8Batch_alpha etc. - #103

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rcwelsh wants to merge 12 commits into
UMPsychMethodsCore:developfrom
rcwelsh:spm8Batch/daisyChained
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spm8Batch/daisyChained to be pulled into spm8Batch_alpha etc.#103
rcwelsh wants to merge 12 commits into
UMPsychMethodsCore:developfrom
rcwelsh:spm8Batch/daisyChained

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@rcwelsh

@rcwelsh rcwelsh commented Jul 31, 2012

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This has the fixes for

warpfMRI:

"w" name issue resolved, loop and log execute correctly.

sliceTime:

 added the options "-F" and "-G" for fmri TR and TGLOBAL parameters, also added the "-m" flag to pass fsl options to slicetimer.

All code : added the "-B" flag to permit the process to run in the foreground. This will facilitate daisy chaining of processes.

dankessler and others added 12 commits July 16, 2012 14:56
…ed to make any localization tweaks aside from manually sourcing spm8Setup or configuring spm8Setup to be automatically sourced for all or some users
…w, much more limited installation requirements
…ase tag from .local/mc_releasetag if available
…ptions for sliceTime, and finally added the flag '-B' to all commands to allow to run in the foreground to facilitate daisy-chaining of processing.
@dankessler

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@rcwelsh this pull request should use spm8Batch_alpha as the base branch rather than develop. Can you open up a new pull request for that, and just copy/paste your description?

@dankessler dankessler closed this Jul 31, 2012
@rcwelsh

rcwelsh commented Jul 31, 2012

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yup - done, sorry about that. i didn't see the pull down at first....

@dankessler

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Reopened in #104

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