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spm8Batch/daisyChained to spm8Batch_alpha - #104

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dankessler merged 3 commits into
UMPsychMethodsCore:spm8Batch_alphafrom
rcwelsh:spm8Batch/daisyChained
Jul 31, 2012
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spm8Batch/daisyChained to spm8Batch_alpha#104
dankessler merged 3 commits into
UMPsychMethodsCore:spm8Batch_alphafrom
rcwelsh:spm8Batch/daisyChained

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@rcwelsh

@rcwelsh rcwelsh commented Jul 31, 2012

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This has the fixes for

warpfMRI:

"w" name issue resolved, loop and log execute correctly.

sliceTime:

 added the options "-F" and "-G" for fmri TR and TGLOBAL parameters, also added the "-m" flag to pass fsl options to slicetimer.

All code : added the "-B" flag to permit the process to run in the foreground. This will facilitate daisy chaining of processes.

rcwelsh added 3 commits July 31, 2012 10:52
…ptions for sliceTime, and finally added the flag '-B' to all commands to allow to run in the foreground to facilitate daisy-chaining of processing.
@dankessler

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@mangstad has +1'd this change, so it will be fast-tracked -> beta -> stable

@dankessler

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This pull request appears to address...

@mangstad or @rcwelsh can you confirm? If so, I'll close those issues with this merge

@mangstad

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yep


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dankessler added a commit that referenced this pull request Jul 31, 2012
spm8Batch/daisyChained to spm8Batch_alpha

Fix #93 - VBM bug
Fix #94 - custom parameters for sliceTiming correction

Add support for running scripts in foreground to support daisy-chaining
@dankessler
dankessler merged commit 893f254 into UMPsychMethodsCore:spm8Batch_alpha Jul 31, 2012
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3 participants